BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006A07LP1|AL425461
(323 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1762 638 0.0
>3x_Contig1762
Length = 22098
Score = 638 bits (321), Expect = 0.0
Identities = 322/323 (99%)
Strand = Plus / Minus
Query: 1 gatcttctttatacaagggatgagcgaatgtgtcattacaattatcaaggtttagaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8175 gatcttctttatacaagggatgagcgaatgtgtcattacaattatcaaggtttagaagga 8116
Query: 61 tagtgttttgtaatgcaatgaaatcctgatcagagtctgcaacatgtagcggagaggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8115 tagtgttttgtaatgcaatgaaatcctgatcagagtctgcaacatgtagcggagaggtgt 8056
Query: 121 tagatttttccagctctgatctttgtgcttgccatatagctaaaaataaatgaaaagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8055 tagatttttccagctctgatctttgtgcttgccatatagctaaaaataaatgaaaagttt 7996
Query: 181 cgtgtagtacgtatttgataccaataaatattgatttcaaggcatttccagtcggatacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7995 cgtgtagtacgtatttgataccaataaatattgatttcaaggcatttccagtcggatacg 7936
Query: 241 tatgaggagaaggaacaatttcccaagaattgctgctgcttattatcatataagaatctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7935 tatgaggagaaggaacaatttcccaagaattgctgctgcttattatcatataagaatctg 7876
Query: 301 aaatatagtaacaatcatmagga 323
|||||||||||||||||| ||||
Sbjct: 7875 aaatatagtaacaatcatcagga 7853
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2892
Number of Sequences: 1807
Number of extensions: 2892
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 323
length of database: 10,358,551
effective HSP length: 16
effective length of query: 307
effective length of database: 10,329,639
effective search space: 3171199173
effective search space used: 3171199173
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)